SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100404
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr19:12788241-12795129
Size: 6888
Super-enhancer rank 404
Number of SE elements: 1
ChIP density(Case|Control): 24849.8376|845.1576
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: JUNB ;
ROSE Overlap JUNB ;
ROSE Proximal BEST2 ; RTBDN ; HOOK2 ; RNASEH2A ; PRDX2 ; MIR5684 ; MAST1 ;
ROSE Closest JUNB ;
Lasso ;
PreSTIGE ;
ABC DHPS ; WDR83OS ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100404 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers