SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100376
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr3:32401958-32470739
Size: 68781
Super-enhancer rank 376
Number of SE elements: 14
ChIP density(Case|Control): 31852.4811|6898.7343
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CMTM7 ;
ROSE Overlap CMTM7 ;
ROSE Proximal MIR548AY ; CMTM7 ; CMTM6 ;
ROSE Closest CMTM7 ;
Lasso ;
PreSTIGE ;
ABC CMTM7 ; OSBPL10 ; GPD1L ; CMTM8 ; OSBPL10-AS1 ; CMTM6 ; DYNC1LI1 ; CNOT10 ; TMPPE ; GLB1 ; CRTAP ; ZNF860 ; STT3B ; FBXL2 ; UBP1 ; CLASP2 ; PDCD6IP ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100376 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers