SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100346
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr22:39308188-39321163
Size: 12975
Super-enhancer rank 346
Number of SE elements: 1
ChIP density(Case|Control): 27169.65|1333.83
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORD83A ;
ROSE Overlap SNORD83B ; RPL3 ; SNORD83A ; SNORD43 ; RNU86 ;
ROSE Proximal RPL3 ; SYNGR1 ;
ROSE Closest SNORD83A ;
Lasso ;
PreSTIGE ;
ABC DNAL4 ; NPTXR ; CBX6 ; APOBEC3B ; APOBEC3C ; APOBEC3F ; APOBEC3H ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100346 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers