SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164100327
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr11:35138457-35192680
Size: 54223
Super-enhancer rank 327
Number of SE elements: 18
ChIP density(Case|Control): 32240.9958|5839.8171
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CD44 ;
ROSE Overlap CD44 ;
ROSE Proximal LOC100507144 ; CD44 ;
ROSE Closest CD44 ;
Lasso ;
PreSTIGE ;
ABC LOC100507144 ; CD44 ; LDLRAD3 ; COMMD9 ; TRIM44 ; TRAF6 ; C11orf74 ; FJX1 ; ELF5 ; PDHX ; APIP ; CAT ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100327 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers