SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100276
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr19:49873617-49882273
Size: 8656
Super-enhancer rank 276
Number of SE elements: 1
ChIP density(Case|Control): 28982.8848|770.384
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AKT1S1 ;
ROSE Overlap AKT1S1 ; TBC1D17 ;
ROSE Proximal MIR6800 ; NUP62 ; IL4I1 ; MIR4750 ; ATF5 ; PTOV1-AS2 ; PTOV1-AS1 ; MIR4749 ; PTOV1 ; PNKP ;
ROSE Closest AKT1S1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100276 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers