SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100273
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr11:831800-845130
Size: 13330
Super-enhancer rank 273
Number of SE elements: 1
ChIP density(Case|Control): 29904.522|1546.28
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: POLR2L ;
ROSE Overlap TSPAN4 ; CD151 ; POLR2L ; CRACR2B ;
ROSE Proximal SNORA52 ; PIDD1 ; CRACR2B ; PNPLA2 ; PANO1 ; SLC25A22 ; TSPAN4 ; CEND1 ; RPLP2 ;
ROSE Closest POLR2L ;
Lasso ;
PreSTIGE ;
ABC TSPAN4 ; POLR2L ; CRACR2B ; PNPLA2 ; CD151 ; AP2A2 ; CHID1 ; RPLP2 ; PIDD1 ; PANO1 ; SLC25A22 ; CEND1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100273 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers