SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100208
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr12:122841136-122899377
Size: 58241
Super-enhancer rank 208
Number of SE elements: 14
ChIP density(Case|Control): 36977.2109|5294.1069
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VPS37B ;
ROSE Overlap HIP1R ; VPS37B ;
ROSE Proximal ;
ROSE Closest VPS37B ;
Lasso ;
PreSTIGE ;
ABC KNTC1 ; RSRC2 ; ZCCHC8 ; CLIP1 ; CLIP1-AS1 ; VPS33A ; DENR ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100208 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers