SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100196
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr12:6361721-6393742
Size: 32021
Super-enhancer rank 196
Number of SE elements: 6
ChIP density(Case|Control): 35434.4386|2862.6774
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SCNN1A ;
ROSE Overlap LTBR ; SCNN1A ;
ROSE Proximal TNFRSF1A ; PLEKHG6 ;
ROSE Closest SCNN1A ;
Lasso ;
PreSTIGE ;
ABC CD9 ; VAMP1 ; TAPBPL ; PLEKHG6 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100196 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers