SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100187
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr6:6780922-6828034
Size: 47112
Super-enhancer rank 187
Number of SE elements: 10
ChIP density(Case|Control): 38231.388|5163.4752
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RREB1 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest LY86-AS1 ;
Lasso ;
PreSTIGE ;
ABC RREB1 ; LOC100506207 ; LYRM4-AS1 ; RPP40 ; LYRM4 ; FARS2 ; LOC101927972 ; SSR1 ; CAGE1 ; RIOK1 ; DSP ; SNRNP48 ; BMP6 ; TXNDC5 ; BLOC1S5-TXNDC5 ; BLOC1S5 ; EEF1E1-BLOC1S5 ; EEF1E1 ; SLC35B3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100187 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers