SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100183
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr7:27163323-27174690
Size: 11367
Super-enhancer rank 183
Number of SE elements: 1
ChIP density(Case|Control): 34734.1419|1311.7518
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXA10-AS ;
ROSE Overlap MIR196B ; HOXA10 ; HOXA10-HOXA9 ; HOXA10-AS ; HOXA9 ;
ROSE Proximal HOXA11 ; HOXA-AS3 ; HOTTIP ; HOXA-AS2 ; HOXA7 ; HOXA3 ; HOXA5 ; HOXA4 ; HOXA13 ; HOXA6 ; HOXA11-AS ;
ROSE Closest HOXA10-AS ;
Lasso ;
PreSTIGE ;
ABC HOXA3 ; HOXA4 ; HOTAIRM1 ; HOXA1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100183 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers