SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100165
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr16:30063496-30089089
Size: 25593
Super-enhancer rank 165
Number of SE elements: 7
ChIP density(Case|Control): 37204.5441|2497.8768
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP4C ;
ROSE Overlap ALDOA ; PPP4C ; TBX6 ;
ROSE Proximal ALDOA ; C16orf92 ; FAM57B ; YPEL3 ; DOC2A ; MAPK3 ; GDPD3 ;
ROSE Closest PPP4C ;
Lasso ;
PreSTIGE ;
ABC PPP4C ; TBX6 ; YPEL3 ; LOC101928595 ; ALDOA ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100165 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers