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Super-enhancer overview

SE ID: SE_02_164100090
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr19:49486781-49498376
Size: 11595
Super-enhancer rank 90
Number of SE elements: 1
ChIP density(Case|Control): 46135.3455|1282.407
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORD35A ;
ROSE Overlap SNORD35A ; SNORD33 ; RPS11 ; SNORD32A ; SNORD35B ; RPL13A ; SNORD34 ;
ROSE Proximal FLT3LG ; RPL13A ; PIH1D1 ; MIR150 ; FCGRT ; RCN3 ; ALDH16A1 ; SLC17A7 ;
ROSE Closest SNORD35A ;
Lasso ;
PreSTIGE ;
ABC GYS1 ; RUVBL2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100090 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers