SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100088
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr1:151193502-151250041
Size: 56539
Super-enhancer rank 88
Number of SE elements: 15
ChIP density(Case|Control): 50059.6306|5122.4334
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PIP5K1A ;
ROSE Overlap PIP5K1A ;
ROSE Proximal PIP5K1A ; PSMD4 ; ZNF687 ; TNFAIP8L2-SCNM1 ; SCNM1 ; LYSMD1 ; SEMA6C ; TMOD4 ; VPS72 ;
ROSE Closest PIP5K1A ;
Lasso ;
PreSTIGE ;
ABC PSMD4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100088 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers