SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164100064
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR2 DMSO
Genomic region: chr9:21668410-21693516
Size: 25106
Super-enhancer rank 64
Number of SE elements: 3
ChIP density(Case|Control): 53867.4336|3306.4602
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR31HG ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest MIR31HG ;
Lasso ;
PreSTIGE ;
ABC CDKN2B ; CDKN2A ; CDKN2A-AS1 ; MTAP ; MIR31HG ; KLHL9 ; FOCAD-AS1 ; FOCAD ; MLLT3 ; CDKN2B-AS1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164100064 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers