SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000968
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr19:18995569-19035792
Size: 40223
Super-enhancer rank 968
Number of SE elements: 11
ChIP density(Case|Control): 14878.4877|3463.2003
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SUGP2 ;
ROSE Overlap SUGP2 ; ARMC6 ;
ROSE Proximal SLC25A42 ;
ROSE Closest SUGP2 ;
Lasso SUGP2 ; SLC25A42 ; GDF1 ; ARMC6 ; CERS1 ; HOMER3 ;
PreSTIGE ;
ABC DDX49 ; COPE ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000968 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers