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Super-enhancer overview

SE ID: SE_02_164000948
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr19:12944139-12948656
Size: 4517
Super-enhancer rank 948
Number of SE elements: 1
ChIP density(Case|Control): 12047.7424|466.6061
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RAD23A ;
ROSE Overlap RAD23A ; CALR ;
ROSE Proximal FARSA ; DAND5 ; MIR6515 ; GADD45GIP1 ; SYCE2 ; NFIX ; MIR5695 ;
ROSE Closest RAD23A ;
Lasso ;
PreSTIGE ;
ABC RTBDN ; MAST1 ; RNASEH2A ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000948 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers