SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000945
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr17:81634653-81637764
Size: 3111
Super-enhancer rank 945
Number of SE elements: 1
ChIP density(Case|Control): 11961.795|336.2991
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NPLOC4 ;
ROSE Overlap TSPAN10 ; NPLOC4 ;
ROSE Proximal TSPAN10 ; ARL16 ; PDE6G ; CCDC137 ; HGS ; OXLD1 ;
ROSE Closest NPLOC4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000945 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers