SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000931
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr3:49672374-49677827
Size: 5453
Super-enhancer rank 931
Number of SE elements: 2
ChIP density(Case|Control): 12140.0139|427.5152
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: APEH ;
ROSE Overlap APEH ;
ROSE Proximal RNF123 ; GMPPB ; AMIGO3 ; MST1 ;
ROSE Closest APEH ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000931 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers