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Super-enhancer overview

SE ID: SE_02_164000908
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr17:28722973-28729887
Size: 6914
Super-enhancer rank 908
Number of SE elements: 1
ChIP density(Case|Control): 12380.2084|486.7456
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TLCD1 ;
ROSE Overlap SNORD42A ; SNORD4B ; TLCD1 ; RPL23A ; NEK8 ;
ROSE Proximal RAB34 ; PROCA1 ; SNORD4A ; SNORD42B ; TRAF4 ;
ROSE Closest TLCD1 ;
Lasso TRAF4 ; RAB34 ; KIAA0100 ; NEK8 ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000908 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers