SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164000895
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr1:156656021-156663972
Size: 7951
Super-enhancer rank 895
Number of SE elements: 3
ChIP density(Case|Control): 12584.0477|611.4319
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NES ;
ROSE Overlap BCAN ;
ROSE Proximal CRABP2 ; HAPLN2 ; BCAN ; NES ;
ROSE Closest NES ;
Lasso ;
PreSTIGE ;
ABC RRNAD1 ; ISG20L2 ; CRABP2 ; NES ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000895 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers