SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000887
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr19:3982091-3988477
Size: 6386
Super-enhancer rank 887
Number of SE elements: 1
ChIP density(Case|Control): 12740.07|694.1582
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EEF2 ;
ROSE Overlap EEF2 ; SNORD37 ;
ROSE Proximal DAPK3 ; MIR637 ; PIAS4 ; NMRK2 ;
ROSE Closest EEF2 ;
Lasso ;
PreSTIGE ;
ABC DAPK3 ; EEF2 ; PIAS4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000887 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers