SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000880
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr20:23353268-23363123
Size: 9855
Super-enhancer rank 880
Number of SE elements: 4
ChIP density(Case|Control): 13126.86|1022.949
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC01431 ;
ROSE Overlap LINC01431 ; NXT1 ;
ROSE Proximal GZF1 ;
ROSE Closest LINC01431 ;
Lasso NXT1 ; GZF1 ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000880 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers