SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000872
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr1:235326540-235338232
Size: 11692
Super-enhancer rank 872
Number of SE elements: 2
ChIP density(Case|Control): 13526.4748|1329.3804
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GGPS1 ;
ROSE Overlap GGPS1 ; ARID4B ;
ROSE Proximal ARID4B ; TBCE ;
ROSE Closest GGPS1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000872 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers