SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164000863
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr16:67546684-67569073
Size: 22389
Super-enhancer rank 863
Number of SE elements: 3
ChIP density(Case|Control): 14107.3089|1862.7648
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CTCF ;
ROSE Overlap FAM65A ; CTCF ;
ROSE Proximal LOC100505942 ;
ROSE Closest CTCF ;
Lasso ;
PreSTIGE ;
ABC C16orf86 ; RIPOR1 ; ENKD1 ; CTCF ; ACD ; PARD6A ; ATP6V0D1 ; LOC100505942 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000863 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers