SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000854
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr9:127446375-127452469
Size: 6094
Super-enhancer rank 854
Number of SE elements: 1
ChIP density(Case|Control): 13007.643|681.9186
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORA65 ;
ROSE Overlap RPL12 ; LRSAM1 ; SNORA65 ;
ROSE Proximal SLC2A8 ; ZNF79 ; LRSAM1 ;
ROSE Closest SNORA65 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000854 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers