SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164000819
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr17:78962249-79001846
Size: 39597
Super-enhancer rank 819
Number of SE elements: 9
ChIP density(Case|Control): 17105.904|4458.6222
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LGALS3BP ;
ROSE Overlap CANT1 ; LGALS3BP ;
ROSE Proximal TIMP2 ; C1QTNF1 ; C1QTNF1-AS1 ; CANT1 ;
ROSE Closest LGALS3BP ;
Lasso ;
PreSTIGE ;
ABC CHMP6 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000819 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers