SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000724
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr12:53470305-53505360
Size: 35055
Super-enhancer rank 724
Number of SE elements: 7
ChIP density(Case|Control): 16857.9495|3333.7305
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAP3K12 ;
ROSE Overlap PCBP2 ; TARBP2 ; MAP3K12 ;
ROSE Proximal PRR13 ; TARBP2 ; PCBP2-OT1 ; PCBP2 ; NPFF ; AMHR2 ; LOC100652999 ;
ROSE Closest MAP3K12 ;
Lasso MAP3K12 ; PCBP2 ; NPFF ;
PreSTIGE ;
ABC SPRYD3 ; IGFBP6 ; SOAT2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000724 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers