SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000714
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr21:46243601-46287682
Size: 44081
Super-enhancer rank 714
Number of SE elements: 10
ChIP density(Case|Control): 17002.0417|3363.3803
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MCM3AP ;
ROSE Overlap MCM3AP-AS1 ; YBEY ; MCM3AP ;
ROSE Proximal C21orf58 ; LSS ; PCNT ; MCM3AP-AS1 ;
ROSE Closest MCM3AP ;
Lasso ;
PreSTIGE ;
ABC SUMO3 ; PTTG1IP ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000714 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers