SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164000680
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr11:65132415-65135766
Size: 3351
Super-enhancer rank 680
Number of SE elements: 1
ChIP density(Case|Control): 14363.0562|332.0841
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SYVN1 ;
ROSE Overlap SYVN1 ;
ROSE Proximal CAPN1 ; VPS51 ; MRPL49 ; SYVN1 ; TMEM262 ; FAU ; ZNHIT2 ; SPDYC ; MIR6751 ; ZFPL1 ; TM7SF2 ; CDCA5 ;
ROSE Closest SYVN1 ;
Lasso NAALADL1 ; AP003068.23 ; SYVN1 ; TM7SF2 ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000680 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers