SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000672
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr5:171386830-171414965
Size: 28135
Super-enhancer rank 672
Number of SE elements: 8
ChIP density(Case|Control): 16864.119|2776.9245
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NPM1 ;
ROSE Overlap NPM1 ;
ROSE Proximal MIR3912 ; FGF18 ;
ROSE Closest NPM1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000672 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers