SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164000613
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr11:2379555-2404132
Size: 24577
Super-enhancer rank 613
Number of SE elements: 9
ChIP density(Case|Control): 16901.6029|2037.4333
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TSSC4 ;
ROSE Overlap CD81 ; TSSC4 ;
ROSE Proximal TRPM5 ; TSSC4 ; CD81-AS1 ; KCNQ1 ;
ROSE Closest TSSC4 ;
Lasso ASCL2 ; CD81 ; C11orf21 ; TRPM5 ; KCNQ1 ; TSPAN32 ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000613 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers