SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164000610
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr16:22016300-22051135
Size: 34835
Super-enhancer rank 610
Number of SE elements: 9
ChIP density(Case|Control): 19211.5025|4323.0235
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C16ORF52 ;
ROSE Overlap C16orf52 ;
ROSE Proximal VWA3A ; PDZD9 ;
ROSE Closest C16orf52 ;
Lasso ;
PreSTIGE ;
ABC SMG1P3 ; SLC7A5P2 ; LOC101927814 ; METTL9 ; SCNN1B ; MFSD13B ; C16orf52 ; UQCRC2 ; PDZD9 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000610 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers