SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000548
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr19:796351-809735
Size: 13384
Super-enhancer rank 548
Number of SE elements: 2
ChIP density(Case|Control): 17027.1248|1302.2632
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR4745 ;
ROSE Overlap MIR4745 ; PTBP1 ;
ROSE Proximal CFD ; LPPR3 ; ELANE ; AZU1 ; PRTN3 ; MISP ; MIR3187 ; PTBP1 ;
ROSE Closest MIR4745 ;
Lasso ;
PreSTIGE ;
ABC PTBP1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000548 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers