SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000538
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr16:2669729-2706132
Size: 36403
Super-enhancer rank 538
Number of SE elements: 8
ChIP density(Case|Control): 18390.7956|2555.4906
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KCTD5 ;
ROSE Overlap ERVK13-1 ; KCTD5 ;
ROSE Proximal SRRM2 ; FLJ42627 ; PRSS27 ; SRRM2-AS1 ;
ROSE Closest KCTD5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000538 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers