SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000500
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr9:35070232-35076027
Size: 5795
Super-enhancer rank 500
Number of SE elements: 2
ChIP density(Case|Control): 17001.9505|632.2345
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VCP ;
ROSE Overlap VCP ; FANCG ;
ROSE Proximal C9orf131 ; PIGO ; FAM214B ; STOML2 ;
ROSE Closest VCP ;
Lasso FANCG ; PIGO ;
PreSTIGE ;
ABC VCP ; FANCG ; STOML2 ; C9orf131 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000500 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers