SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000463
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr19:50368703-50388019
Size: 19316
Super-enhancer rank 463
Number of SE elements: 4
ChIP density(Case|Control): 18769.3572|1558.8012
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NR1H2 ;
ROSE Overlap NR1H2 ; POLD1 ;
ROSE Proximal KCNC3 ; POLD1 ; MYBPC2 ; SPIB ; NAPSA ; NAPSB ;
ROSE Closest NR1H2 ;
Lasso ;
PreSTIGE ;
ABC PTOV1-AS2 ; PNKP ; AKT1S1 ; PTOV1-AS1 ; PTOV1 ; MED25 ; TBC1D17 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000463 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers