SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000426
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr11:63973708-64008489
Size: 34781
Super-enhancer rank 426
Number of SE elements: 6
ChIP density(Case|Control): 20628.6111|2420.7576
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: OTUB1 ;
ROSE Overlap OTUB1 ; COX8A ; MACROD1 ;
ROSE Proximal OTUB1 ; NAA40 ; RNU6-45P ;
ROSE Closest OTUB1 ;
Lasso OTUB1 ; COX8A ; RCOR2 ; FLRT1 ;
PreSTIGE ;
ABC LOC105369340 ; VEGFB ; FKBP2 ; PPP1R14B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000426 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers