SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000403
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr19:58553022-58561185
Size: 8163
Super-enhancer rank 403
Number of SE elements: 1
ChIP density(Case|Control): 19674.4626|946.908
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UBE2M ;
ROSE Overlap CHMP2A ; MZF1-AS1 ; UBE2M ;
ROSE Proximal ZBTB45 ; TRIM28 ; CENPBD1P1 ; SLC27A5 ; MZF1 ; MIR6807 ;
ROSE Closest UBE2M ;
Lasso ZBTB45 ; SLC27A5 ; TRIM28 ; MZF1 ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000403 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers