SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000280
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr19:1852218-1866467
Size: 14249
Super-enhancer rank 280
Number of SE elements: 1
ChIP density(Case|Control): 23224.4451|1162.7184
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KLF16 ;
ROSE Overlap KLF16 ;
ROSE Proximal ATP8B3 ; REXO1 ; LOC100288123 ; ADAT3 ; MIR1909 ; SCAMP4 ; ABHD17A ;
ROSE Closest KLF16 ;
Lasso REXO1 ; ABHD17A ;
PreSTIGE ;
ABC REXO1 ; KLF16 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000280 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers