SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_164000259
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr19:49874000-49879623
Size: 5623
Super-enhancer rank 259
Number of SE elements: 1
ChIP density(Case|Control): 23313.5203|513.3799
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AKT1S1 ;
ROSE Overlap AKT1S1 ; TBC1D17 ;
ROSE Proximal MIR6800 ; IL4I1 ; MIR4750 ; ATF5 ; PTOV1-AS2 ; PTOV1-AS1 ; MIR4749 ; NUP62 ; PTOV1 ; PNKP ;
ROSE Closest AKT1S1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000259 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers