SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000179
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr4:1292253-1352533
Size: 60280
Super-enhancer rank 179
Number of SE elements: 18
ChIP density(Case|Control): 31423.964|4653.616
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAEA ;
ROSE Overlap MAEA ; UVSSA ;
ROSE Proximal CTBP1 ; MAEA ; CTBP1-AS2 ; CRIPAK ;
ROSE Closest MAEA ;
Lasso ;
PreSTIGE ;
ABC FGFR3 ; UVSSA ; MAEA ; CTBP1-AS2 ; CTBP1 ; LOC100130872 ; FGFRL1 ; DGKQ ; GAK ; TMEM175 ; LOC100129917 ; PIGG ; ZNF721 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000179 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers