SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000178
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr12:49012458-49061898
Size: 49440
Super-enhancer rank 178
Number of SE elements: 8
ChIP density(Case|Control): 30875.28|4063.968
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KMT2D ;
ROSE Overlap KMT2D ; PRKAG1 ;
ROSE Proximal WNT10B ; DHH ; WNT1 ; DDN ; LMBR1L ; RHEBL1 ;
ROSE Closest KMT2D ;
Lasso PRKAG1 ; DHH ; KMT2D ; DDN ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000178 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers