SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000153
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr17:40094621-40138638
Size: 44017
Super-enhancer rank 153
Number of SE elements: 8
ChIP density(Case|Control): 32885.1007|3772.2569
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MSL1 ;
ROSE Overlap NR1D1 ; MSL1 ;
ROSE Proximal THRA ; RAPGEFL1 ; MED24 ; CASC3 ; MIR6866 ;
ROSE Closest MSL1 ;
Lasso RAPGEFL1 ; NR1D1 ; MED24 ; RARA ; MSL1 ;
PreSTIGE ;
ABC CNP ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000153 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers