SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000132
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr19:16069757-16127095
Size: 57338
Super-enhancer rank 132
Number of SE elements: 14
ChIP density(Case|Control): 35176.863|5085.8806
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RAB8A ;
ROSE Overlap RAB8A ; TPM4 ;
ROSE Proximal LINC00905 ; CIB3 ; HSH2D ;
ROSE Closest RAB8A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000132 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers