SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000127
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr1:998350-1003118
Size: 4768
Super-enhancer rank 127
Number of SE elements: 1
ChIP density(Case|Control): 31682.4064|505.8848
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ;
ROSE Overlap HES4 ;
ROSE Proximal PLEKHN1 ; NOC2L ; PERM1 ; AGRN ; ISG15 ; KLHL17 ;
ROSE Closest HES4 ;
Lasso ;
PreSTIGE ;
ABC PERM1 ; AGRN ; RNF223 ; C1orf159 ; LINC01342 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000127 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers