SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000089
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr19:4795121-4872920
Size: 77799
Super-enhancer rank 89
Number of SE elements: 20
ChIP density(Case|Control): 42626.0721|6449.5371
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TICAM1 ;
ROSE Overlap TICAM1 ; FEM1A ; PLIN3 ;
ROSE Proximal MIR7-3HG ; ARRDC5 ; UHRF1 ; MIR7-3 ;
ROSE Closest TICAM1 ;
Lasso TICAM1 ;
PreSTIGE ;
ABC TICAM1 ; PLIN3 ; FEM1A ; DPP9 ; UHRF1 ; KDM4B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000089 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers