SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000079
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr17:59623763-59709029
Size: 85266
Super-enhancer rank 79
Number of SE elements: 23
ChIP density(Case|Control): 52984.2924|14895.9702
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VMP1 ;
ROSE Overlap CLTC ; VMP1 ; PTRH2 ;
ROSE Proximal ;
ROSE Closest VMP1 ;
Lasso ;
PreSTIGE ;
ABC LOC101927877 ; MARCH10 ; MRC2 ; TLK2 ; METTL2A ; MED13 ; INTS2 ; BRIP1 ; C17orf82 ; LOC101927855 ; BCAS3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000079 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers