SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_164000009
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: colon
Biosample name: HCT116_Nut0h_BR1 DMSO
Genomic region: chr1:8002616-8100784
Size: 98168
Super-enhancer rank 9
Number of SE elements: 24
ChIP density(Case|Control): 88950.0248|11544.5568
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ERRFI1 ;
ROSE Overlap ERRFI1 ;
ROSE Proximal PARK7 ;
ROSE Closest ERRFI1 ;
Lasso ERRFI1 ;
PreSTIGE ;
ABC PARK7 ; ERRFI1 ; SLC45A1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_164000009 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers