SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_162800978
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562 knockout silencer1 and 2 regions DKO
Genomic region: chr12:116546342-116561855
Size: 15513
Super-enhancer rank 978
Number of SE elements: 5
ChIP density(Case|Control): 8066.76|2576.7093
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAP1LC3B2 ;
ROSE Overlap MAP1LC3B2 ;
ROSE Proximal LINC00173 ;
ROSE Closest MAP1LC3B2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_162800978 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers