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Super-enhancer overview

SE ID: SE_02_162800905
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Hydrothorax
Biosample name: K562 knockout silencer1 and 2 regions DKO
Genomic region: chr19:3669110-3672755
Size: 3645
Super-enhancer rank 905
Number of SE elements: 1
ChIP density(Case|Control): 6637.1805|864.594
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PIP5K1C ;
ROSE Overlap PIP5K1C ;
ROSE Proximal TJP3 ; CACTIN ; PIP5K1C ;
ROSE Closest PIP5K1C ;
Lasso ;
PreSTIGE ;
ABC PIP5K1C ; TJP3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_162800905 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers